The Week Of Monday 10 October 2016 Archives by subject

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Starting: Mon Oct 10 00:30:02 EDT 2016
Ending: Sun Oct 16 23:52:13 EDT 2016
Messages: 225

• [JIRA] (PC-132) Upgrade to Exomiser 7.2.2   Orion Buske (JIRA)
• [JIRA] (PC-132) Upgrade to Exomiser 7.2.2   Orion Buske (JIRA)
• [JIRA] (PC-132) Upgrade to Exomiser 7.2.2   Orion Buske (JIRA)
• [JIRA] (PC-141) No candidates identified from the indel VCF file   Orion Buske (JIRA)
• [JIRA] (PN-119) Exomiser candidate genes included in MME response should be flagged as such   Orion Buske (JIRA)
• [JIRA] (PN-119) Exomiser candidate genes included in MME response should be flagged as such   Orion Buske (JIRA)
• [JIRA] (PN-119) Exomiser candidate genes included in MME response should be flagged as such   Orion Buske (JIRA)
• [JIRA] (PN-119) Exomiser candidate genes included in MME response should be flagged as such   Orion Buske (JIRA)
• [JIRA] (PN-141) 'Genetic' consent should be required for candidate variant entry   Orion Buske (JIRA)
• [JIRA] (PN-141) 'Genetic' consent should not restrict candidate gene entry   Orion Buske (JIRA)
• [JIRA] (PN-145) Improper handling when multiple vcf files are uploaded   Orion Buske (JIRA)
• [JIRA] (PN-145) Improper handling when multiple vcf files are uploaded   Orion Buske (JIRA)
• [JIRA] (PN-145) Improper handling when multiple vcf files are uploaded   Orion Buske (JIRA)
• [JIRA] (PN-145) Improper handling when multiple vcf files are uploaded   Sergiu Dumitriu (JIRA)
• [JIRA] (PORG-32) Update smoke test for PT 1.3M3 - family-studies   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-1698) Vocabularies should auto-generate their Solr configuration at startup   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2154) Migrate existing pedigrees   Andriy Misyura (JIRA)
• [JIRA] (PT-2171) Default Family identifier to proband last name   Marta Girdea (JIRA)
• [JIRA] (PT-2171) Default Family identifier to proband last name   Marta Girdea (JIRA)
• [JIRA] (PT-2230) Allow exporting pedigree as an image from within pedigree editor   veronikaslc (JIRA)
• [JIRA] (PT-2230) Allow exporting pedigree as an image from within pedigree editor   veronikaslc (JIRA)
• [JIRA] (PT-2230) Allow exporting pedigree as an image from within pedigree editor   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2619) Implement: REST-full API for accessing family studies   Sasha Andjic (JIRA)
• [JIRA] (PT-2619) Implement: REST-full API for accessing family studies   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2644) Configuration to enable/disable automatic phenotypes from measurements   Marta Girdea (JIRA)
• [JIRA] (PT-2644) Configuration to enable/disable automatic phenotypes from measurements   Marta Girdea (JIRA)
• [JIRA] (PT-2644) Configuration to enable/disable automatic phenotypes from measurements   Marta Girdea (JIRA)
• [JIRA] (PT-2644) Configuration to enable/disable automatic phenotypes from measurements   Marta Girdea (JIRA)
• [JIRA] (PT-2644) Configuration to enable/disable automatic phenotypes from measurements   Marta Girdea (JIRA)
• [JIRA] (PT-2665) Pedigree editor: workflow and functionality improvements   Sasha Andjic (JIRA)
• [JIRA] (PT-2665) Pedigree editor: workflow and functionality improvements   Sasha Andjic (JIRA)
• [JIRA] (PT-2723) Users should be able to select what traits are reflected in the "affected" column when exporting the PED file of a pedigree   Andriy Misyura (JIRA)
• [JIRA] (PT-2723) Users should be able to select what traits are reflected in the "affected" column when exporting the PED file of a pedigree   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2723) Users should be able to select what traits are reflected in the "affected" column when exporting the PED file of a pedigree   Andriy Misyura (JIRA)
• [JIRA] (PT-2723) Users should be able to select what traits are reflected in the "affected" column when exporting the PED file of a pedigree   Andriy Misyura (JIRA)
• [JIRA] (PT-2789) Pressing "None of the above.." button doesn't clear "As of" drop down value   veronikaslc (JIRA)
• [JIRA] (PT-2789) Pressing "None of the above.." button doesn't clear "As of" drop down value   Marta Girdea (JIRA)
• [JIRA] (PT-2789) Pressing "None of the above.." button doesn't clear "As of" drop down value   Marta Girdea (JIRA)
• [JIRA] (PT-2807) Allow creating/updating multiple patients at once via REST   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2808) JSON tool should parse to org.json.JSONArray/org.json.JSONObject, not net.sf.json.JSON   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2815) Family updates should be performed under the correct user   Andriy Misyura (JIRA)
• [JIRA] (PT-2817) Sync pedigree SVG image with patient record when patient data is modified outside pedigree editor   Andriy Misyura (JIRA)
• [JIRA] (PT-2817) Sync pedigree SVG image with patient record when patient data is modified outside pedigree editor   Andriy Misyura (JIRA)
• [JIRA] (PT-2817) Sync pedigree SVG image with patient record when patient data is modified outside pedigree editor   Andriy Misyura (JIRA)
• [JIRA] (PT-2820) Default Create or Browse buttons to patient option   Sasha Andjic (JIRA)
• [JIRA] (PT-2822) In Chrome, the "Advanced data filters" accumulate duplicate entries   Alex Henrie (JIRA)
• [JIRA] (PT-2825) Correct wording in pedigree incorrect drag error message   Andriy Misyura (JIRA)
• [JIRA] (PT-2825) Correct wording in pedigree incorrect drag error message   Andriy Misyura (JIRA)
• [JIRA] (PT-2825) Correct wording in pedigree incorrect drag error message   Andriy Misyura (JIRA)
• [JIRA] (PT-2825) Correct wording in pedigree incorrect drag error message   Andriy Misyura (JIRA)
• [JIRA] (PT-2825) Correct wording in pedigree incorrect drag error message   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2825) Correct wording on error message   Sasha Andjic (JIRA)
• [JIRA] (PT-2825) Correct wording on error message   Sasha Andjic (JIRA)
• [JIRA] (PT-2827) Allow users to comment on family records   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2827) Allow users to comment on family records   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2827) Allow users to comment on family records   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2828) Fix typos   Sasha Andjic (JIRA)
• [JIRA] (PT-2828) Fix typos   Sasha Andjic (JIRA)
• [JIRA] (PT-2828) Fix typos   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2828) Fix typos: "form" is used instead of "from" in several places in the pedigree editor   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Andriy Misyura (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2829) Can not push patients to some older PhenoTips servers   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2830) Families REST resources should list the methods allowed on self and related resources   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2830) REST resources should list the methods allowed on self and related resources   Sasha Andjic (JIRA)
• [JIRA] (PT-2830) REST resources should list the methods allowed on self and related resources   Sasha Andjic (JIRA)
• [JIRA] (PT-2830) REST resources should list the methods allowed on self and related resources   Sasha Andjic (JIRA)
• [JIRA] (PT-2830) REST resources should list the methods allowed on self and related resources   Sasha Andjic (JIRA)
• [JIRA] (PT-2830) REST resources should list the methods allowed on self and related resources   Sasha Andjic (JIRA)
• [JIRA] (PT-2830) REST resources should list the methods allowed on self and related resources   Sasha Andjic (JIRA)
• [JIRA] (PT-2831) Discuss: Handling candidate genes in phenotips   Sasha Andjic (JIRA)
• [JIRA] (PT-2831) Discuss: Handling candidate genes in phenotips   Sasha Andjic (JIRA)
• [JIRA] (PT-2832) Cannot create PersonGroup from a relationship   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2832) Cannot create PersonGroup from a relationship   Sasha Andjic (JIRA)
• [JIRA] (PT-2832) Cannot create PersonGroup from a relationship   Sasha Andjic (JIRA)
• [JIRA] (PT-2833) "Affected" and the first "Confirmed gene" use the exact same color in the pedigree   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2834) Pedigree PED export will crash when any cancers are selected for export   Andriy Misyura (JIRA)
• [JIRA] (PT-2834) Pedigree PED export will crash when any cancers are selected for export   Andriy Misyura (JIRA)
• [JIRA] (PT-2834) Pedigree PED export will crash when any cancers are selected for export   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2834) Reflected cancers in PED files will not Export   Alexander Lapena (JIRA)
• [JIRA] (PT-2834) Reflected cancers in PED files will not Export   Alexander Lapena (JIRA)
• [JIRA] (PT-2834) Reflected cancers in PED files will not Export   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2834) Reflected cancers in PED files will not Export   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2834) Reflected cancers in PED files will not Export   Andriy Misyura (JIRA)
• [JIRA] (PT-2834) Reflected cancers in PED files will not Export   Andriy Misyura (JIRA)
• [JIRA] (PT-2834) Reflected cancers in PED files will not Export   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Pedigree PED import fails when a family has childless relationships   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Pedigree PED import fails when a family has childless relationships   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Pedigree PED import fails when a family has childless relationships   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Roundtrip PED export/import fails for a complex family   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2835) Roundtrip PED export/import fails for a complex family   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Roundtrip PED export/import fails for a complex family   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Roundtrip PED export/import fails for a complex family   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Roundtrip PED export/import fails for a complex family   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Roundtrip PED export/import fails for a complex family   Andriy Misyura (JIRA)
• [JIRA] (PT-2835) Roundtrip PED export/import fails for a complex family   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2836) Saving a pedigree while the user is no longer authenticated displays uninformative error message   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2838) Set the same font size on both consent warnings   Sasha Andjic (JIRA)
• [JIRA] (PT-2838) Set the same font size on both consent warnings   Sasha Andjic (JIRA)
• [JIRA] (PT-2839) Cannot upgrade RPM installations from older versions to 1.3M3   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2839) Cannot upgrade RPM installations from older versions to 1.3M3   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2839) Cannot upgrade RPM installations from older versions to 1.3M3   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2839) Cannot upgrade RPM installations from older versions to 1.3M3   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2840) Switching to Spanish doesn't work   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2840) Switching to Spanish doesn't work   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2841) Remove PEDIGREE text from Family's page Pedigree section   Sasha Andjic (JIRA)
• [JIRA] (PT-2841) Remove PEDIGREE text from Family's page Pedigree section   Sasha Andjic (JIRA)
• [JIRA] (PT-2841) Remove PEDIGREE text from Family's page Pedigree section   Sasha Andjic (JIRA)
• [JIRA] (PT-2842) Consider displaying the family identifier in the pedigree editor   Sasha Andjic (JIRA)
• [JIRA] (PT-2842) Consider displaying the family identifier in the pedigree editor   Sasha Andjic (JIRA)
• [JIRA] (PT-2843) On the Family page family identifier label and the corresponding field should be closer   Sasha Andjic (JIRA)
• [JIRA] (PT-2843) On the Family page family identifier label and the corresponding field should be closer   Sasha Andjic (JIRA)
• [JIRA] (PT-2844) Better handling of "unaffeced" conditions in pedigre eeditor   Andriy Misyura (JIRA)
• [JIRA] (PT-2844) Better handling of "unaffeced" conditions in pedigre eeditor   Andriy Misyura (JIRA)
• [JIRA] (PT-2844) Better handling of "unaffected" conditions in pedigree editor   Sergiu Dumitriu (JIRA)
• [JIRA] (PT-2845) Discuss: Pushing records without mandatory consent on sender   Sasha Andjic (JIRA)
• [JIRA] (PT-2845) Discuss: Pushing records without mandatory consent on sender   Sasha Andjic (JIRA)
• [phenotips/patient-network]   GitHub
• [phenotips/patient-network]   GitHub
• [phenotips/patient-network] 2a3211: PN-145: Improper handling when multiple vcf files ...   GitHub
• [phenotips/patient-network] 2a3211: PN-145: Improper handling when multiple vcf files ...   GitHub
• [phenotips/patient-network] 9ad763: PC-132: Update to Exomiser 7.2.2   GitHub
• [phenotips/patient-network] 9ad763: PC-132: Update to Exomiser 7.2.2   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips]   GitHub
• [phenotips/phenotips] 020e3f: [misc] Fixed bad \u escape   GitHub
• [phenotips/phenotips] 0596f6: PT-2230: Allow exporting pedigree as an image from...   GitHub
• [phenotips/phenotips] 0596f6: PT-2230: Allow exporting pedigree as an image from...   GitHub
• [phenotips/phenotips] 0abb91: PT-2802: Add the ability to create and browse fami...   GitHub
• [phenotips/phenotips] 13a724: [cleanup] Fixed javadoc errors   GitHub
• [phenotips/phenotips] 142204: PT-2807: added functionality for creating multiple...   GitHub
• [phenotips/phenotips] 15228b: [bugfix] NPE thrown when pushing a patient to an o...   GitHub
• [phenotips/phenotips] 1a3852: PT-2644: Configuration to enable/disable automatic...   GitHub
• [phenotips/phenotips] 233704: [misc] Add Spanish translations to UIX_Fields   GitHub
• [phenotips/phenotips] 237542: PT-2839: Cannot upgrade RPM installations from old...   GitHub
• [phenotips/phenotips] 27432d: [misc] Updated parent in moved submodules   GitHub
• [phenotips/phenotips] 2ae532: Fixing typos   GitHub
• [phenotips/phenotips] 2ae532: Fixing typos   GitHub
• [phenotips/phenotips] 2d65a5: PT-2837: HTML markup allowed in Gene comments   GitHub
• [phenotips/phenotips] 3427c6: PT-2137: [misc] Various bugfixes after family-stud...   GitHub
• [phenotips/phenotips] 355191: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] 370717: PT-2230: Allow exporting pedigree as an image from...   GitHub
• [phenotips/phenotips] 37196c: [misc] Custom filename for file download   GitHub
• [phenotips/phenotips] 3ce7a6: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] 3ce7a6: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] 3f6b6d: [misc] Adding missing translations   GitHub
• [phenotips/phenotips] 43bb67: PT-2230: Allow exporting pedigree as an image from...   GitHub
• [phenotips/phenotips] 44f28f: [cleanup] Applied codestyle   GitHub
• [phenotips/phenotips] 46ab11: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] 4c6359: [misc] Add Spanish translations to UIX_Fields   GitHub
• [phenotips/phenotips] 52a07c: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] 536845: PT-2825: Correct wording in pedigree incorrect dra...   GitHub
• [phenotips/phenotips] 55bf1f: [misc] Adding missing translations   GitHub
• [phenotips/phenotips] 58fbe3: PT-2802: Add the ability to create and browse fami...   GitHub
• [phenotips/phenotips] 5b1069: [release] Set the phenotips.version to the right v...   GitHub
• [phenotips/phenotips] 605c75: PT-2789: Pressing 'None of the above..' button doe...   GitHub
• [phenotips/phenotips] 605c75: PT-2789: Pressing 'None of the above..' button doe...   GitHub
• [phenotips/phenotips] 737555: [bugfix] Sometimes the old family studies migrator...   GitHub
• [phenotips/phenotips] 77ac41: [misc] Allow objects to be dynamically added in th...   GitHub
• [phenotips/phenotips] 79af65: PT-2230: Allow exporting pedigree as an image from...   GitHub
• [phenotips/phenotips] 79af65: PT-2230: Allow exporting pedigree as an image from...   GitHub
• [phenotips/phenotips] 7f76ce: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] 80c455: PT-2644: Configuration to enable/disable automatic...   GitHub
• [phenotips/phenotips] 81737e: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] 83a71d: [cleanup] Moved measurement configuration files to...   GitHub
• [phenotips/phenotips] 854cb2: [misc] Option to use custom file name for file dow...   GitHub
• [phenotips/phenotips] 854cb2: [misc] Option to use custom file name for file dow...   GitHub
• [phenotips/phenotips] 8c9b42: PT-2808: Implemented parseToJSONObject and parseTo...   GitHub
• [phenotips/phenotips] 8ca6ad: PT-2834: Pedigree PED export will crash when any c...   GitHub
• [phenotips/phenotips] 94c977: [misc] Gene table view minor cosmetic improvement.   GitHub
• [phenotips/phenotips] 94c977: [misc] Gene table view minor cosmetic improvement.   GitHub
• [phenotips/phenotips] 9e78b4: [misc] Better javadoc   GitHub
• [phenotips/phenotips] 9ea0cd: [misc] Fixed JavaDoc bug   GitHub
• [phenotips/phenotips] a6fd3e: [bugfix] Fixed possible NPE   GitHub
• [phenotips/phenotips] aa905a: [misc] Updated httpcommons dependencies   GitHub
• [phenotips/phenotips] aadd5a: PT-2617: Add a REST-full API for accessing family ...   GitHub
• [phenotips/phenotips] b25396: [release] Set the phenotips.version to the right v...   GitHub
• [phenotips/phenotips] b2e4f3: [release] Updated translations   GitHub
• [phenotips/phenotips] b64727: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] b9e062: [misc] Adding missing translations   GitHub
• [phenotips/phenotips] bb9971: PT-1698: Vocabularies should auto-generate their S...   GitHub
• [phenotips/phenotips] bede38: PT-1698: Vocabularies should auto-generate their S...   GitHub
• [phenotips/phenotips] bffb08: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] c7013a: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] cf740e: PT-2230: Allow exporting pedigree as an image from...   GitHub
• [phenotips/phenotips] d43a21: [misc] Updated license header   GitHub
• [phenotips/phenotips] d4d355: PT-1698: Vocabularies should auto-generate their S...   GitHub
• [phenotips/phenotips] d8ee8a: [release] Updated HPO and HGNC vocabularies to the...   GitHub
• [phenotips/phenotips] d92af4: [release] Set the phenotips.version to the right v...   GitHub
• [phenotips/phenotips] dcea79: [misc] Option to use custom file name for file dow...   GitHub
• [phenotips/phenotips] e07efc: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/phenotips] e776ce: PT-2825: Correct wording in pedigree incorrect dra...   GitHub
• [phenotips/phenotips] e776ce: PT-2825: Correct wording in pedigree incorrect dra...   GitHub
• [phenotips/phenotips] ed6489: [misc] Option to use custom file name for file dow...   GitHub
• [phenotips/phenotips] ef686a: [misc] Fixed typo   GitHub
• [phenotips/phenotips] f2008f: [misc] Add Spanish translations to UIX_Fields   GitHub
• [phenotips/phenotips] f2008f: [misc] Add Spanish translations to UIX_Fields   GitHub
• [phenotips/phenotips] f7af0f: PT-2723: Users should be able to select what trait...   GitHub
• [phenotips/remote-matching]   GitHub
• [phenotips/remote-matching] 42f884: RM-46: MME matches should require candidate gene o...   GitHub
• [phenotips/remote-matching] 8f011a: PN-119: Require candidate genes to match over MME   GitHub
• [phenotips/remote-matching] c97457: [cleanup] Removed unnecessary imports   GitHub

Last message date: Sun Oct 16 23:52:13 EDT 2016
Archived on: Sun Oct 16 23:52:15 EDT 2016

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