[phenotips/phenotips] 3ce7a6: PT-2723: Users should be able to select what trait...

GitHub noreply at github.com
Thu Oct 13 02:02:36 EDT 2016


  Branch: refs/heads/master
  Home:   https://github.com/phenotips/phenotips
  Commit: 3ce7a67dd421e452976968bca7fa20f0b5ff7965
      https://github.com/phenotips/phenotips/commit/3ce7a67dd421e452976968bca7fa20f0b5ff7965
  Author: veronikaslc <veronika.koltunov at gmail.com>
  Date:   2016-10-12 (Wed, 12 Oct 2016)

  Changed paths:
    M components/pedigree/resources/src/main/resources/pedigree/editor.css
    M components/pedigree/resources/src/main/resources/pedigree/model/export.js
    M components/pedigree/resources/src/main/resources/pedigree/view/disorderLegend.js
    M components/pedigree/resources/src/main/resources/pedigree/view/exportSelector.js
    M components/pedigree/resources/src/main/resources/pedigree/view/hpoLegend.js
    M components/pedigree/resources/src/main/resources/pedigree/view/legend.js

  Log Message:
  -----------
  PT-2723: Users should be able to select what traits are reflected in the affected column when exporting the PED file of a pedigree

Initial implementation: added phenotypes, cancers, genes and made disorders selectable


  Commit: 52a07cece87135d316a6ae0d08f078d95f732889
      https://github.com/phenotips/phenotips/commit/52a07cece87135d316a6ae0d08f078d95f732889
  Author: Andrew Misyura <asm at phenotips.org>
  Date:   2016-10-12 (Wed, 12 Oct 2016)

  Changed paths:
    M components/pedigree/resources/src/main/resources/pedigree/model/export.js
    M components/pedigree/resources/src/main/resources/pedigree/view/exportSelector.js

  Log Message:
  -----------
  PT-2723: Users should be able to select what traits are reflected in the affected column when exporting the PED file of a pedigree

Improved status-computing logic and fixed a bug with rejected genes causing export crash + code optimization


  Commit: f7fa745253a3be564c336f49df571c3bed53fc2f
      https://github.com/phenotips/phenotips/commit/f7fa745253a3be564c336f49df571c3bed53fc2f
  Author: Andrew Misyura <asm at phenotips.org>
  Date:   2016-10-12 (Wed, 12 Oct 2016)

  Changed paths:
    M components/pedigree/resources/src/main/resources/pedigree/editor.css
    M components/pedigree/resources/src/main/resources/pedigree/model/export.js
    M components/pedigree/resources/src/main/resources/pedigree/view/printDialog.js
    M components/pedigree/resources/src/main/resources/pedigree/view/workspace.js

  Log Message:
  -----------
  PT-2137: [misc] Various bugfixes after family-studies merge

- fixed PED export (missing id column for nodes linked to PhenoTips patients)
- fixed print dialog UI
- fixed SVG processing (removal of interactive parts of SVG image failed on export/print)


  Commit: d9423a5ca0bd1209864d716d13c4a465c341ee19
      https://github.com/phenotips/phenotips/commit/d9423a5ca0bd1209864d716d13c4a465c341ee19
  Author: Sergiu Dumitriu <sdumitriu at users.noreply.github.com>
  Date:   2016-10-13 (Thu, 13 Oct 2016)

  Changed paths:
    M components/pedigree/resources/src/main/resources/pedigree/editor.css
    M components/pedigree/resources/src/main/resources/pedigree/model/export.js
    M components/pedigree/resources/src/main/resources/pedigree/view/disorderLegend.js
    M components/pedigree/resources/src/main/resources/pedigree/view/exportSelector.js
    M components/pedigree/resources/src/main/resources/pedigree/view/hpoLegend.js
    M components/pedigree/resources/src/main/resources/pedigree/view/legend.js
    M components/pedigree/resources/src/main/resources/pedigree/view/printDialog.js
    M components/pedigree/resources/src/main/resources/pedigree/view/workspace.js

  Log Message:
  -----------
  Merge pull request #2098 from phenotips/PT-2723

PT-2723: Users should be able to select what traits are reflected in the affected column when exporting the PED file of a pedigree


Compare: https://github.com/phenotips/phenotips/compare/42d7d555cc06...d9423a5ca0bd


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