[phenotips-notifications] Build failed in Jenkins: PhenoTips-pull-requests #967

ci at phenotips.org ci at phenotips.org
Thu Oct 22 04:44:55 EDT 2015


See <https://ci.phenotips.org/job/PhenoTips-pull-requests/967/>

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[INFO] Reactor Summary:
[INFO] 
[INFO] PhenoTips - Parent POM ............................ SUCCESS [1.934s]
[INFO] PhenoTips - Resource packages ..................... SUCCESS [0.147s]
[INFO] PhenoTips - Jetty ................................. SUCCESS [0.032s]
[INFO] PhenoTips - Jetty Lifecycle Listener - Log Writer . SUCCESS [0.053s]
[INFO] PhenoTips - Jetty Lifecycle Listener - Open Browser  SUCCESS [0.056s]
[INFO] PhenoTips - Jetty Resources ....................... SUCCESS [0.217s]
[INFO] PhenoTips - Solr configuration files .............. SUCCESS [3.716s]
[INFO] PhenoTips - Various Java components ............... SUCCESS [0.361s]
[INFO] PhenoTips - Default administrative account and default rights  SUCCESS [1.668s]
[INFO] PhenoTips - Joda Time Script Service .............. SUCCESS [1.444s]
[INFO] PhenoTips - UI Widgets ............................ SUCCESS [0.155s]
[INFO] PhenoTips - UI Widgets - Documents providing various widgets  SUCCESS [0.352s]
[INFO] PhenoTips - Skin .................................. SUCCESS [0.099s]
[INFO] PhenoTips - Skin - Documents providing the custom Skin  SUCCESS [0.082s]
[INFO] PhenoTips - General navigation .................... SUCCESS [0.281s]
[INFO] PhenoTips - Navigation - Java APIs ................ SUCCESS [0.322s]
[INFO] PhenoTips - OBO to Solr conversion ................ SUCCESS [0.196s]
[INFO] PhenoTips - Data model constants .................. SUCCESS [0.084s]
[INFO] XWiki Platform - Core - Users - Parent POM ........ SUCCESS [0.085s]
[INFO] XWiki Platform - Core - Users - API ............... SUCCESS [0.060s]
[INFO] PhenoTips - Patient data .......................... SUCCESS [0.030s]
[INFO] PhenoTips - Patient data - Java APIs .............. SUCCESS [0.065s]
[INFO] PhenoTips - Vocabularies .......................... SUCCESS [0.054s]
[INFO] PhenoTips - Vocabularies - APIs ................... SUCCESS [0.817s]
[INFO] PhenoTips - Vocabularies - Human Phenotype Ontology integration  SUCCESS [0.066s]
[INFO] PhenoTips - Vocabularies - Human Phenotype Ontology integration - APIs  SUCCESS [0.107s]
[INFO] PhenoTips - Vocabularies - Human Phenotype Ontology integration - Documents providing HPO services  SUCCESS [0.011s]
[INFO] PhenoTips - Vocabularies - Online Mendelian Inheritance in Man integration  SUCCESS [0.014s]
[INFO] PhenoTips - Vocabularies - Online Mendelian Inheritance in Man integration - APIs  SUCCESS [0.024s]
[INFO] PhenoTips - Vocabularies - Online Mendelian Inheritance in Man integration - Documents providing services  SUCCESS [0.009s]
[INFO] PhenoTips - Vocabularies - HUGO Gene Nomenclature Committee (GeneNames) integration  SUCCESS [0.006s]
[INFO] PhenoTips - Vocabularies - HUGO Gene Nomenclature Committee (GeneNames) integration - APIs  SUCCESS [0.027s]
[INFO] PhenoTips - Vocabularies - HUGO Gene Nomenclature Committee (GeneNames) integration - Documents providing services  SUCCESS [0.008s]
[INFO] PhenoTips - Solr Access Service ................... SUCCESS [0.013s]
[INFO] PhenoTips - Solr Access Service - Java code ....... SUCCESS [0.026s]
[INFO] PhenoTips - Solr Access Service - Documents providing phenotype and disease suggestions  SUCCESS [0.016s]
[INFO] PhenoTips - Component Manager Registry ............ SUCCESS [0.031s]
[INFO] PhenoTips - Application configuration ............. SUCCESS [0.006s]
[INFO] PhenoTips - Application configuration - Java APIs . SUCCESS [0.042s]
[INFO] PhenoTips - Patient data - Default implementation for the Java APIs  SUCCESS [0.080s]
[INFO] XWiki Translation Manager ......................... SUCCESS [0.028s]
[INFO] PhenoTips - Various Tools ......................... SUCCESS [0.023s]
[INFO] PhenoTips - Patient data - Documents providing the patient class, sheet and display code  SUCCESS [0.018s]
[INFO] PhenoTips - Users and Groups ...................... SUCCESS [0.006s]
[INFO] PhenoTips - Users and Groups - Wiki Documents ..... SUCCESS [0.022s]
[INFO] PhenoTips - Application configuration - Documents providing the configuration classes and their display code  SUCCESS [0.009s]
[INFO] PhenoTips - Patient access rules .................. SUCCESS [0.005s]
[INFO] PhenoTips - Patient access rules - Wiki Documents . SUCCESS [0.008s]
[INFO] PhenoTips - Navigation - Documents providing the homepage and the All Data page  SUCCESS [0.020s]
[INFO] PhenoTips - User - Profile - UI ................... SUCCESS [0.038s]
[INFO] PhenoTips - Data export ........................... SUCCESS [0.006s]
[INFO] PhenoTips - Data export - Spreadsheet Export APIs . SUCCESS [0.031s]
[INFO] PhenoTips - Data export - Documents providing the Export functionality  SUCCESS [0.017s]
[INFO] PhenoTips - Patient measurements .................. SUCCESS [0.018s]
[INFO] PhenoTips - Patient measurements - Java APIs ...... SUCCESS [0.030s]
[INFO] PhenoTips - Patient measurements - Documents providing the measurements functionality in the UI  SUCCESS [0.016s]
[INFO] PhenoTips - Studies ............................... SUCCESS [0.006s]
[INFO] PhenoTips - Studies - Java APIs ................... SUCCESS [0.008s]
[INFO] PhenoTips - Studies - Wiki Documents .............. SUCCESS [0.010s]
[INFO] PhenoTips - Vocabularies - Documents providing the patient class, sheet and display code  SUCCESS [0.014s]
[INFO] PhenoTips - Patient data sharing .................. SUCCESS [0.006s]
[INFO] PhenoTips - Patient data sharing - Communication Protocol Details  SUCCESS [0.014s]
[INFO] PhenoTips - Patient data sharing - Secure data storage API  SUCCESS [0.054s]
[INFO] PhenoTips - Patient data sharing - Push Java APIs . SUCCESS [0.055s]
[INFO] PhenoTips - Patient data sharing - Push Configuration UI  SUCCESS [0.008s]
[INFO] PhenoTips - Specificity Meter ..................... SUCCESS [0.007s]
[INFO] PhenoTips - Specificity Meter - Documents providing the UI  SUCCESS [0.007s]
[INFO] PhenoTips - Diagnosis Suggestion Service .......... SUCCESS [0.016s]
[INFO] PhenoTips - Diagnosis Suggestion Java Code ........ SUCCESS [0.034s]
[INFO] PhenoTips - Diagnosis Suggestion- Documents providing phenotype and disease suggestions  SUCCESS [0.008s]
[INFO] PhenoTips - Pedigree .............................. SUCCESS [0.005s]
[INFO] PhenoTips - Pedigree - Application Documents ...... SUCCESS [0.008s]
[INFO] PhenoTips - Application interface ................. SUCCESS [0.012s]
[INFO] PhenoTips - Pedigree - JS and CSS Resources ....... SUCCESS [0.189s]
[INFO] PhenoTips - Base War package ...................... SUCCESS [0.704s]
[INFO] PhenoTips - Widget - Java APIs .................... SUCCESS [0.031s]
[INFO] PhenoTips - Skin - Java APIs ...................... SUCCESS [0.057s]
[INFO] PhenoTips - Patient data - Page Objects ........... SUCCESS [0.025s]
[INFO] PhenoTips - Navigation - Testing Page Objects ..... SUCCESS [0.032s]
[INFO] PhenoTips - Navigation - Functional Tests ......... SUCCESS [0.005s]
[INFO] PhenoTips - Vocabularies - Chemical Entities of Biological Interest  SUCCESS [0.012s]
[INFO] PhenoTips - Vocabularies - Chemical Entities of Biological Interest integration - APIs  SUCCESS [0.040s]
[INFO] PhenoTips - Vocabularies - Ethnicity Ontology integration  SUCCESS [0.014s]
[INFO] PhenoTips - Vocabularies - Ethnicity Ontology integration - APIs  SUCCESS [0.030s]
[INFO] PhenoTips - Patient data - Data migrations ........ SUCCESS [0.024s]
[INFO] PhenoTips - Patient Data - REST services .......... SUCCESS [0.268s]
[INFO] PhenoTips - Users and Groups - Java APIs .......... SUCCESS [0.020s]
[INFO] PhenoTips - Patient access rules - Java APIs ...... SUCCESS [0.084s]
[INFO] PhenoTips - Patient data - Solr indexing .......... SUCCESS [0.044s]
[INFO] PhenoTips - Patient data - Functional Tests ....... SUCCESS [0.005s]
[INFO] PhenoTips - Extra fields for patient data ......... SUCCESS [0.018s]
[INFO] PhenoTips - Extra fields for patient data - Medication  SUCCESS [0.007s]
[INFO] PhenoTips - Extra fields for patient data - Medication - Java APIs  SUCCESS [0.048s]
[INFO] PhenoTips - Extra fields for patient data - Medication - Documents providing the medication data class and display code  SUCCESS [0.007s]
[INFO] PhenoTips - Security .............................. SUCCESS [0.005s]
[INFO] PhenoTips - Security - Authorization APIs ......... SUCCESS [0.041s]
[INFO] PhenoTips - Security - Bridge between the old XWiki security interfaces and the new security components  SUCCESS [0.049s]
[INFO] PhenoTips - Patient access rules - Migrations ..... SUCCESS [0.032s]
[INFO] PhenoTips - Patient data sharing - Receiver Java APIs  SUCCESS [0.015s]
[INFO] PhenoTips - Patient data sharing - Receiver UI .... SUCCESS [0.020s]
[INFO] PhenoTips - Patient measurements - Data migrations  SUCCESS [0.013s]
[INFO] XWiki Platform - Core - Users - Wiki .............. SUCCESS [0.030s]
[INFO] PhenoTips - Application configuration - Data migrations  SUCCESS [0.029s]
[INFO] PhenoTips - Storage migrator ...................... SUCCESS [0.005s]
[INFO] PhenoTips - Storage migrators - Java APIs ......... SUCCESS [0.031s]
[INFO] PhenoTips - Storage migrators - Attachments ....... SUCCESS [0.012s]
[INFO] PhenoTips - Storage migrators - Attachments - DataBase store  SUCCESS [0.014s]
[INFO] PhenoTips - Storage migrators - Attachments - Filesystem store  SUCCESS [0.013s]
[INFO] PhenoTips - Storage migrators - Attachments - Generic migrator  SUCCESS [0.053s]
[INFO] PhenoTips - NCBI eUtils Services .................. SUCCESS [0.005s]
[INFO] PhenoTips - NCBI eUtils Services - Java APIs ...... SUCCESS [0.040s]
[INFO] PhenoTips - NCBI eUtils Services - Documents providing PubMed relevant articles suggestions  SUCCESS [0.007s]
[INFO] PhenoTips - Specificity Meter - Java APIs ......... SUCCESS [0.085s]
[INFO] PhenoTips - MedSavant Integration - Java APIs ..... SUCCESS [0.013s]
[INFO] PhenoTips - Pedigree - Java APIs .................. SUCCESS [0.033s]
[INFO] PhenoTips - Misc - Support for proxy authentication  SUCCESS [0.069s]
[INFO] PhenoTips - Record Locking ........................ SUCCESS [0.035s]
[INFO] PhenoTips - Record Locking - API .................. SUCCESS [0.042s]
[INFO] PhenoTips - Record Locking - UI - Documents providing record locking functionality  SUCCESS [0.045s]
[INFO] PhenoTips - Distribution packages ................. SUCCESS [0.013s]
[INFO] PhenoTips - HSQLDB Database ....................... SUCCESS [0.287s]
[INFO] PhenoTips - War package ........................... SUCCESS [0.887s]
[INFO] PhenoTips - Standalone Distribution ............... SUCCESS [0.007s]
[INFO] PhenoTips - DMG Distribution ...................... SUCCESS [0.004s]
[INFO] PhenoTips - RPM Distribution ...................... SUCCESS [0.086s]
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[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 39.098s
[INFO] Finished at: Thu Oct 22 04:44:46 EDT 2015
[INFO] Final Memory: 34M/275M
[INFO] ------------------------------------------------------------------------
Setting status of 8b9ea67c36511eb107bf245d4e0a8c6a25e23356 to FAILURE with url https://ci.phenotips.org/job/PhenoTips-pull-requests/967/ and message: 'Build finished.'


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